WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G11A.15.1 Sequence Name  Y54G11A.15.1
Length (nt)  1151   Chromosome Location  II: 14287618-14289068
Chromosome . Primary Identifier  II Chromosome Location . Start  14287618
Chromosome Location . End  14289068 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G11A.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005265 srh-42 Y54G11A.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G11A.15 Y54G11A.15 1026   II: 14287743-14287828

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54G11A.15.1 14287618 14289068 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74455   211   II: 14287618-14287828 Caenorhabditis elegans
Exon74456   618   II: 14287873-14288490 Caenorhabditis elegans
Exon74457   322   II: 14288747-14289068 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54G11A.15.1 14287618 14289068 -1

1 Sequence

Length
1151

1 Sequence Ontology Term

Identifier Name Description
transcript