WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K04B12.3a Sequence Name  K04B12.3a
Length (nt)  2622   Chromosome Location  II: 14441440-14441520
Chromosome . Primary Identifier  II Chromosome Location . Start  14441440
Chromosome Location . End  14441520
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04B12.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41824 SMG-8, isoform a 100.0 873 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00084798
WBRNAi00049881
WBRNAi00084793
WBRNAi00016579
WBRNAi00109792
WBRNAi00033936
WBRNAi00061848
WBRNAi00109651
WBRNAi00109745
WBRNAi00109698
WBRNAi00079865

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K04B12.3a 14441440 14441520 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010551 smg-8 K04B12.3 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:K04B12.3a 14441440 14441520 1
CDS:K04B12.3a 14441566 14441667 1
CDS:K04B12.3a 14441733 14441989 1
CDS:K04B12.3a 14442037 14442211 1
CDS:K04B12.3a 14442918 14443463 1
CDS:K04B12.3a 14444047 14444433 1
CDS:K04B12.3a 14444903 14445400 1
CDS:K04B12.3a 14445943 14446373 1
CDS:K04B12.3a 14446998 14447142 1

1 Sequence

Length
2622

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K04B12.3a.1 K04B12.3a.1 2744   II: 14441409-14447233