WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2e.1 Sequence Name  ZC101.2e.1
Length (nt)  10128   Chromosome Location  II: 14647479-14666852
Chromosome . Primary Identifier  II Chromosome Location . Start  14647479
Chromosome Location . End  14666852 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2e ZC101.2e 10128   II: 14647479-14647857

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2e.1 14647479 14666852 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

35 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75457   379   II: 14647479-14647857 Caenorhabditis elegans
Exon75459   223   II: 14647920-14648142 Caenorhabditis elegans
Exon75462   276   II: 14648552-14648827 Caenorhabditis elegans
Exon75465   550   II: 14648886-14649435 Caenorhabditis elegans
Exon75468   113   II: 14649495-14649607 Caenorhabditis elegans
Exon75471   148   II: 14649651-14649798 Caenorhabditis elegans
Exon75474   170   II: 14649844-14650013 Caenorhabditis elegans
Exon75477   219   II: 14650061-14650279 Caenorhabditis elegans
Exon75480   213   II: 14650326-14650538 Caenorhabditis elegans
Exon75483   305   II: 14650594-14650898 Caenorhabditis elegans
Exon75487   208   II: 14651003-14651210 Caenorhabditis elegans
Exon75502   127   II: 14652683-14652809 Caenorhabditis elegans
Exon75506   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75521   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75534   207   II: 14654571-14654777 Caenorhabditis elegans
Exon75547   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75560   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75572   279   II: 14657213-14657491 Caenorhabditis elegans
Exon75583   282   II: 14657638-14657919 Caenorhabditis elegans
Exon75593   297   II: 14658038-14658334 Caenorhabditis elegans
Exon75603   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75616   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75629   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75640   190   II: 14659964-14660153 Caenorhabditis elegans
Exon75650   89   II: 14661026-14661114 Caenorhabditis elegans
Exon75662   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75676   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75690   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75704   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75718   867   II: 14663345-14664211 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2e.1 14647479 14666852 -1

1 Sequence

Length
10128

1 Sequence Ontology Term

Identifier Name Description
transcript