WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2f.1 Sequence Name  ZC101.2f.1
Length (nt)  7678   Chromosome Location  II: 14652141-14666943
Chromosome . Primary Identifier  II Chromosome Location . Start  14652141
Chromosome Location . End  14666943 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2f ZC101.2f 7170   II: 14652558-14652809

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2f.1 14652141 14666943 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75460   669   II: 14652141-14652809 Caenorhabditis elegans
Exon75477   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75492   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75505   207   II: 14654571-14654777 Caenorhabditis elegans
Exon75518   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75531   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75543   279   II: 14657213-14657491 Caenorhabditis elegans
Exon75554   282   II: 14657638-14657919 Caenorhabditis elegans
Exon75564   297   II: 14658038-14658334 Caenorhabditis elegans
Exon75574   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75587   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75600   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75633   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75647   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75661   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75675   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75689   867   II: 14663345-14664211 Caenorhabditis elegans
Exon75703   346   II: 14664632-14664977 Caenorhabditis elegans
Exon75717   331   II: 14665646-14665976 Caenorhabditis elegans
Exon75731   273   II: 14666057-14666329 Caenorhabditis elegans
Exon75745   306   II: 14666388-14666693 Caenorhabditis elegans
Exon75764   185   II: 14666759-14666943 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2f.1 14652141 14666943 -1

1 Sequence

Length
7678

1 Sequence Ontology Term

Identifier Name Description
transcript