WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2c.1 Sequence Name  ZC101.2c.1
Length (nt)  7393   Chromosome Location  II: 14652143-14666942
Chromosome . Primary Identifier  II Chromosome Location . Start  14652143
Chromosome Location . End  14666942 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2c ZC101.2c 6888   II: 14652558-14652809

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2c.1 14652143 14666942 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75464   667   II: 14652143-14652809 Caenorhabditis elegans
Exon75474   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75489   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75502   207   II: 14654571-14654777 Caenorhabditis elegans
Exon75515   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75528   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75561   297   II: 14658038-14658334 Caenorhabditis elegans
Exon75571   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75584   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75597   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75609   190   II: 14659964-14660153 Caenorhabditis elegans
Exon75619   89   II: 14661026-14661114 Caenorhabditis elegans
Exon75630   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75644   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75658   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75672   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75686   867   II: 14663345-14664211 Caenorhabditis elegans
Exon75700   346   II: 14664632-14664977 Caenorhabditis elegans
Exon75714   331   II: 14665646-14665976 Caenorhabditis elegans
Exon75728   273   II: 14666057-14666329 Caenorhabditis elegans
Exon75742   306   II: 14666388-14666693 Caenorhabditis elegans
Exon75760   184   II: 14666759-14666942 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2c.1 14652143 14666942 -1

1 Sequence

Length
7393

1 Sequence Ontology Term

Identifier Name Description
transcript