WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2n.1 Sequence Name  ZC101.2n.1
Length (nt)  7582   Chromosome Location  II: 14652143-14666852
Chromosome . Primary Identifier  II Chromosome Location . Start  14652143
Chromosome Location . End  14666852 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2n.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2n ZC101.2n 7167   II: 14652558-14652809

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2n.1 14652143 14666852 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75492   667   II: 14652143-14652809 Caenorhabditis elegans
Exon75513   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75528   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75541   207   II: 14654571-14654777 Caenorhabditis elegans
Exon75554   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75567   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75578   279   II: 14657213-14657491 Caenorhabditis elegans
Exon75597   297   II: 14658038-14658334 Caenorhabditis elegans
Exon75610   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75623   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75635   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75645   190   II: 14659964-14660153 Caenorhabditis elegans
Exon75655   89   II: 14661026-14661114 Caenorhabditis elegans
Exon75669   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75683   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75697   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75711   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75724   867   II: 14663345-14664211 Caenorhabditis elegans
Exon75739   346   II: 14664632-14664977 Caenorhabditis elegans
Exon75753   331   II: 14665646-14665976 Caenorhabditis elegans
Exon75767   273   II: 14666057-14666329 Caenorhabditis elegans
Exon75781   306   II: 14666388-14666693 Caenorhabditis elegans
Exon75788   94   II: 14666759-14666852 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2n.1 14652143 14666852 -1

1 Sequence

Length
7582

1 Sequence Ontology Term

Identifier Name Description
transcript