WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2o.1 Sequence Name  ZC101.2o.1
Length (nt)  7855   Chromosome Location  II: 14652143-14666852
Chromosome . Primary Identifier  II Chromosome Location . Start  14652143
Chromosome Location . End  14666852 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2o.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2o ZC101.2o 7440   II: 14652558-14652809

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2o.1 14652143 14666852 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75493   667   II: 14652143-14652809 Caenorhabditis elegans
Exon75514   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75529   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75543   198   II: 14655351-14655548 Caenorhabditis elegans
Exon75555   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75568   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75579   279   II: 14657213-14657491 Caenorhabditis elegans
Exon75588   282   II: 14657638-14657919 Caenorhabditis elegans
Exon75598   297   II: 14658038-14658334 Caenorhabditis elegans
Exon75611   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75624   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75636   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75646   190   II: 14659964-14660153 Caenorhabditis elegans
Exon75656   89   II: 14661026-14661114 Caenorhabditis elegans
Exon75670   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75684   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75698   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75712   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75725   867   II: 14663345-14664211 Caenorhabditis elegans
Exon75740   346   II: 14664632-14664977 Caenorhabditis elegans
Exon75754   331   II: 14665646-14665976 Caenorhabditis elegans
Exon75768   273   II: 14666057-14666329 Caenorhabditis elegans
Exon75782   306   II: 14666388-14666693 Caenorhabditis elegans
Exon75789   94   II: 14666759-14666852 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2o.1 14652143 14666852 -1

1 Sequence

Length
7855

1 Sequence Ontology Term

Identifier Name Description
transcript