WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2c.1 Sequence Name  ZC101.2c.1
Length (nt)  7393   Chromosome Location  II: 14652143-14666942
Chromosome . Primary Identifier  II Chromosome Location . Start  14652143
Chromosome Location . End  14666942 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2c ZC101.2c 6888   II: 14652558-14652809

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2c.1 14652143 14666942 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75494   667   II: 14652143-14652809 Caenorhabditis elegans
Exon75504   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75519   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75532   207   II: 14654571-14654777 Caenorhabditis elegans
Exon75545   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75558   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75591   297   II: 14658038-14658334 Caenorhabditis elegans
Exon75601   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75614   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75627   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75639   190   II: 14659964-14660153 Caenorhabditis elegans
Exon75649   89   II: 14661026-14661114 Caenorhabditis elegans
Exon75660   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75674   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75688   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75702   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75716   867   II: 14663345-14664211 Caenorhabditis elegans
Exon75730   346   II: 14664632-14664977 Caenorhabditis elegans
Exon75744   331   II: 14665646-14665976 Caenorhabditis elegans
Exon75758   273   II: 14666057-14666329 Caenorhabditis elegans
Exon75772   306   II: 14666388-14666693 Caenorhabditis elegans
Exon75790   184   II: 14666759-14666942 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2c.1 14652143 14666942 -1

1 Sequence

Length
7393

1 Sequence Ontology Term

Identifier Name Description
transcript