WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2i.1 Sequence Name  ZC101.2i.1
Length (nt)  7096   Chromosome Location  II: 14652144-14666943
Chromosome . Primary Identifier  II Chromosome Location . Start  14652144
Chromosome Location . End  14666943 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2i ZC101.2i 6591   II: 14652558-14652809

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2i.1 14652144 14666943 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75495   666   II: 14652144-14652809 Caenorhabditis elegans
Exon75508   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75523   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75536   207   II: 14654571-14654777 Caenorhabditis elegans
Exon75549   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75562   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75605   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75618   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75631   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75641   190   II: 14659964-14660153 Caenorhabditis elegans
Exon75651   89   II: 14661026-14661114 Caenorhabditis elegans
Exon75664   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75678   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75692   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75706   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75720   867   II: 14663345-14664211 Caenorhabditis elegans
Exon75734   346   II: 14664632-14664977 Caenorhabditis elegans
Exon75748   331   II: 14665646-14665976 Caenorhabditis elegans
Exon75762   273   II: 14666057-14666329 Caenorhabditis elegans
Exon75776   306   II: 14666388-14666693 Caenorhabditis elegans
Exon75795   185   II: 14666759-14666943 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2i.1 14652144 14666943 -1

1 Sequence

Length
7096

1 Sequence Ontology Term

Identifier Name Description
transcript