WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2j.1 Sequence Name  ZC101.2j.1
Length (nt)  7278   Chromosome Location  II: 14652150-14666852
Chromosome . Primary Identifier  II Chromosome Location . Start  14652150
Chromosome Location . End  14666852 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2j ZC101.2j 6870   II: 14652558-14652809

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2j.1 14652150 14666852 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75496   660   II: 14652150-14652809 Caenorhabditis elegans
Exon75509   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75524   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75537   207   II: 14654571-14654777 Caenorhabditis elegans
Exon75550   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75563   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75574   279   II: 14657213-14657491 Caenorhabditis elegans
Exon75606   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75619   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75632   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75642   190   II: 14659964-14660153 Caenorhabditis elegans
Exon75652   89   II: 14661026-14661114 Caenorhabditis elegans
Exon75665   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75679   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75693   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75707   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75721   867   II: 14663345-14664211 Caenorhabditis elegans
Exon75735   346   II: 14664632-14664977 Caenorhabditis elegans
Exon75749   331   II: 14665646-14665976 Caenorhabditis elegans
Exon75763   273   II: 14666057-14666329 Caenorhabditis elegans
Exon75777   306   II: 14666388-14666693 Caenorhabditis elegans
Exon75785   94   II: 14666759-14666852 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2j.1 14652150 14666852 -1

1 Sequence

Length
7278

1 Sequence Ontology Term

Identifier Name Description
transcript