WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2r.1 Sequence Name  ZC101.2r.1
Length (nt)  9816   Chromosome Location  II: 14652558-14684296
Chromosome . Primary Identifier  II Chromosome Location . Start  14652558
Chromosome Location . End  14684296 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2r.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2r ZC101.2r 9816   II: 14652558-14652809

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2r.1 14652558 14684296 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

34 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75470   252   II: 14652558-14652809 Caenorhabditis elegans
Exon75486   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75500   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75512   207   II: 14654571-14654777 Caenorhabditis elegans
Exon75526   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75539   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75550   279   II: 14657213-14657491 Caenorhabditis elegans
Exon75559   282   II: 14657638-14657919 Caenorhabditis elegans
Exon75569   297   II: 14658038-14658334 Caenorhabditis elegans
Exon75582   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75595   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75607   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75617   190   II: 14659964-14660153 Caenorhabditis elegans
Exon75627   89   II: 14661026-14661114 Caenorhabditis elegans
Exon75641   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75655   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75669   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75683   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75696   867   II: 14663345-14664211 Caenorhabditis elegans
Exon75711   346   II: 14664632-14664977 Caenorhabditis elegans
Exon75725   331   II: 14665646-14665976 Caenorhabditis elegans
Exon75739   273   II: 14666057-14666329 Caenorhabditis elegans
Exon75753   306   II: 14666388-14666693 Caenorhabditis elegans
Exon75767   161   II: 14675475-14675635 Caenorhabditis elegans
Exon75769   502   II: 14675916-14676417 Caenorhabditis elegans
Exon75771   447   II: 14676526-14676972 Caenorhabditis elegans
Exon75773   129   II: 14677659-14677787 Caenorhabditis elegans
Exon75783   181   II: 14681143-14681323 Caenorhabditis elegans
Exon75785   110   II: 14681693-14681802 Caenorhabditis elegans
Exon75787   151   II: 14682191-14682341 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2r.1 14652558 14684296 -1

1 Sequence

Length
9816

1 Sequence Ontology Term

Identifier Name Description
transcript