WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E2A.2.4 Sequence Name  Y54E2A.2.4
Length (nt)  1628   Chromosome Location  II: 14746890-14752495
Chromosome . Primary Identifier  II Chromosome Location . Start  14746890
Chromosome Location . End  14752495 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E2A.2.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013188 smg-9 Y54E2A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E2A.2 Y54E2A.2 1158   II: 14747909-14748053

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E2A.2.4 14746890 14752495 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75952   436   II: 14746890-14747325 Caenorhabditis elegans
Exon75957   173   II: 14747881-14748053 Caenorhabditis elegans
Exon75961   307   II: 14748868-14749174 Caenorhabditis elegans
Exon75965   169   II: 14749797-14749965 Caenorhabditis elegans
Exon75969   306   II: 14751117-14751422 Caenorhabditis elegans
Exon75972   237   II: 14752259-14752495 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E2A.2.4 14746890 14752495 -1

1 Sequence

Length
1628

1 Sequence Ontology Term

Identifier Name Description
transcript