WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E2A.2.1 Sequence Name  Y54E2A.2.1
Length (nt)  1274   Chromosome Location  II: 14747793-14752489
Chromosome . Primary Identifier  II Chromosome Location . Start  14747793
Chromosome Location . End  14752489 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E2A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013188 smg-9 Y54E2A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E2A.2 Y54E2A.2 1158   II: 14747909-14748053

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E2A.2.1 14747793 14752489 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75954   261   II: 14747793-14748053 Caenorhabditis elegans
Exon75958   307   II: 14748868-14749174 Caenorhabditis elegans
Exon75962   169   II: 14749797-14749965 Caenorhabditis elegans
Exon75966   306   II: 14751117-14751422 Caenorhabditis elegans
Exon75970   231   II: 14752259-14752489 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E2A.2.1 14747793 14752489 -1

1 Sequence

Length
1274

1 Sequence Ontology Term

Identifier Name Description
transcript