WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01D2.5a.2 Sequence Name  W01D2.5a.2
Length (nt)  1413   Chromosome Location  II: 14812531-14814894
Chromosome . Primary Identifier  II Chromosome Location . Start  14812531
Chromosome Location . End  14814894 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01D2.5a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012182 osta-3 W01D2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01D2.5a W01D2.5a 1047   II: 14813033-14813156

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01D2.5a.2 14812531 14814894 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76069   131   II: 14812531-14812661 Caenorhabditis elegans
Exon76071   125   II: 14813032-14813156 Caenorhabditis elegans
Exon76073   155   II: 14813519-14813673 Caenorhabditis elegans
Exon76075   239   II: 14813730-14813968 Caenorhabditis elegans
Exon76078   196   II: 14814036-14814231 Caenorhabditis elegans
Exon76081   160   II: 14814279-14814438 Caenorhabditis elegans
Exon76085   407   II: 14814488-14814894 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01D2.5a.2 14812531 14814894 1

1 Sequence

Length
1413

1 Sequence Ontology Term

Identifier Name Description
transcript