WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W01D2.5a Sequence Name  W01D2.5a
Length (nt)  1047   Chromosome Location  II: 14813033-14813156
Chromosome . Primary Identifier  II Chromosome Location . Start  14813033
Chromosome Location . End  14813156
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01D2.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20128 OSTA-3, isoform a 39.4 348 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00054527
WBRNAi00019468
WBRNAi00036150
WBRNAi00062392

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W01D2.5a 14813033 14813156 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012182 osta-3 W01D2.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:W01D2.5a 14813033 14813156 1
CDS:W01D2.5a 14813519 14813673 1
CDS:W01D2.5a 14813730 14813968 1
CDS:W01D2.5a 14814036 14814231 1
CDS:W01D2.5a 14814279 14814438 1
CDS:W01D2.5a 14814488 14814660 1

1 Sequence

Length
1047

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W01D2.5a.2 W01D2.5a.2 1413   II: 14812531-14814894
Transcript:W01D2.5a.1 W01D2.5a.1 1283   II: 14813026-14814889