WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01D2.5a.1 Sequence Name  W01D2.5a.1
Length (nt)  1283   Chromosome Location  II: 14813026-14814889
Chromosome . Primary Identifier  II Chromosome Location . Start  14813026
Chromosome Location . End  14814889 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01D2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012182 osta-3 W01D2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01D2.5a W01D2.5a 1047   II: 14813033-14813156

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01D2.5a.1 14813026 14814889 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76070   131   II: 14813026-14813156 Caenorhabditis elegans
Exon76072   155   II: 14813519-14813673 Caenorhabditis elegans
Exon76074   239   II: 14813730-14813968 Caenorhabditis elegans
Exon76077   196   II: 14814036-14814231 Caenorhabditis elegans
Exon76080   160   II: 14814279-14814438 Caenorhabditis elegans
Exon76084   402   II: 14814488-14814889 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01D2.5a.1 14813026 14814889 1

1 Sequence

Length
1283

1 Sequence Ontology Term

Identifier Name Description
transcript