WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E01F3.1f.1 Sequence Name  E01F3.1f.1
Length (nt)  1737   Chromosome Location  II: 14931238-14952612
Chromosome . Primary Identifier  II Chromosome Location . Start  14931238
Chromosome Location . End  14952612 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01F3.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008443 pde-3 E01F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E01F3.1f E01F3.1f 1737   II: 14931238-14931333

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E01F3.1f.1 14931238 14952612 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76241   96   II: 14931238-14931333 Caenorhabditis elegans
Exon76244   207   II: 14932999-14933205 Caenorhabditis elegans
Exon76253   101   II: 14945217-14945317 Caenorhabditis elegans
Exon76267   247   II: 14949791-14950037 Caenorhabditis elegans
Exon76277   112   II: 14950100-14950211 Caenorhabditis elegans
Exon76287   257   II: 14950388-14950644 Caenorhabditis elegans
Exon76297   119   II: 14951002-14951120 Caenorhabditis elegans
Exon76307   358   II: 14951188-14951545 Caenorhabditis elegans
Exon76317   136   II: 14951626-14951761 Caenorhabditis elegans
Exon76327   101   II: 14952351-14952451 Caenorhabditis elegans
Exon76333   3   II: 14952610-14952612 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E01F3.1f.1 14931238 14952612 1

1 Sequence

Length
1737

1 Sequence Ontology Term

Identifier Name Description
transcript