WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.3.1 Sequence Name  Y53F4B.3.1
Length (nt)  617   Chromosome Location  II: 14968633-14969354
Chromosome . Primary Identifier  II Chromosome Location . Start  14968633
Chromosome Location . End  14969354 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013150 pole-4 Y53F4B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.3 Y53F4B.3 540   II: 14968701-14968957

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.3.1 14968633 14969354 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76360   325   II: 14968633-14968957 Caenorhabditis elegans
Exon76361   85   II: 14969007-14969091 Caenorhabditis elegans
Exon76362   207   II: 14969148-14969354 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.3.1 14968633 14969354 -1

1 Sequence

Length
617

1 Sequence Ontology Term

Identifier Name Description
transcript