WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.11a.1 Sequence Name  Y53F4B.11a.1
Length (nt)  858   Chromosome Location  II: 15010748-15013408
Chromosome . Primary Identifier  II Chromosome Location . Start  15010748
Chromosome Location . End  15013408 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013158 Y53F4B.11 Y53F4B.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.11a Y53F4B.11a 765   II: 15010792-15010890

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.11a.1 15010748 15013408 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76387   143   II: 15010748-15010890 Caenorhabditis elegans
Exon76388   228   II: 15010954-15011181 Caenorhabditis elegans
Exon76389   201   II: 15012739-15012939 Caenorhabditis elegans
Exon76391   147   II: 15012985-15013131 Caenorhabditis elegans
Exon76394   139   II: 15013270-15013408 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.11a.1 15010748 15013408 1

1 Sequence

Length
858

1 Sequence Ontology Term

Identifier Name Description
transcript