WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:Y53F4B.11a Sequence Name  Y53F4B.11a
Length (nt)  765   Chromosome Location  II: 15010792-15010890
Chromosome . Primary Identifier  II Chromosome Location . Start  15010792
Chromosome Location . End  15010890
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.11a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22400 Y53F4B.11, isoform a 29.8 254 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00057264
WBRNAi00020931
WBRNAi00037413

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y53F4B.11a 15010792 15010890 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013158 Y53F4B.11 Y53F4B.11 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y53F4B.11a 15010792 15010890 1
CDS:Y53F4B.11a 15010954 15011181 1
CDS:Y53F4B.11a 15012739 15012939 1
CDS:Y53F4B.11a 15012985 15013131 1
CDS:Y53F4B.11a 15013270 15013359 1

1 Sequence

Length
765

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y53F4B.11a.1 Y53F4B.11a.1 858   II: 15010748-15013408