WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y53F4B.20 Sequence Name  Y53F4B.20
Length (nt)  2085   Chromosome Location  II: 15084476-15084628
Chromosome . Primary Identifier  II Chromosome Location . Start  15084476
Chromosome Location . End  15084628
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.20

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48528 Y53F4B.20 78.6 694 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00057274
WBRNAi00020938
WBRNAi00103608

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y53F4B.20 15084476 15084628 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013166 Y53F4B.20 Y53F4B.20 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y53F4B.20 15084476 15084628 1
CDS:Y53F4B.20 15084683 15084805 1
CDS:Y53F4B.20 15084864 15085057 1
CDS:Y53F4B.20 15085125 15085314 1
CDS:Y53F4B.20 15085967 15086044 1
CDS:Y53F4B.20 15086528 15086643 1
CDS:Y53F4B.20 15086685 15086785 1
CDS:Y53F4B.20 15086922 15087121 1
CDS:Y53F4B.20 15087858 15088115 1
CDS:Y53F4B.20 15088209 15088317 1
CDS:Y53F4B.20 15088856 15089134 1
CDS:Y53F4B.20 15089215 15089498 1

1 Sequence

Length
2085

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y53F4B.20.1 Y53F4B.20.1 2142   II: 15084470-15089549