WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y46E12BL.4a Sequence Name  Y46E12BL.4a
Length (nt)  1452   Chromosome Location  II: 15207523-15207571
Chromosome . Primary Identifier  II Chromosome Location . Start  15207523
Chromosome Location . End  15207571
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46E12BL.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41470 SPSB-1, isoform a 53.0 483 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00056665

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y46E12BL.4a 15207523 15207571 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021597 spsb-1 Y46E12BL.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y46E12BL.4a 15207523 15207571 1
CDS:Y46E12BL.4a 15220192 15220445 1
CDS:Y46E12BL.4a 15222831 15223191 1
CDS:Y46E12BL.4a 15224724 15224815 1
CDS:Y46E12BL.4a 15226033 15226728 1

1 Sequence

Length
1452

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y46E12BL.4a.1 Y46E12BL.4a.1 1452   II: 15207523-15226728