WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00056665 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021597 spsb-1 Y46E12BL.4 Caenorhabditis elegans

9 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46E12BL.4i Y46E12BL.4i 1194   II: 15196733-15196793
CDS:Y46E12BL.4a Y46E12BL.4a 1452   II: 15207523-15207571
CDS:Y46E12BL.4f Y46E12BL.4f 1053   II: 15207523-15207571
CDS:Y46E12BL.4e Y46E12BL.4e 1242   II: 15216407-15216638
CDS:Y46E12BL.4g Y46E12BL.4g 1236   II: 15216407-15216638
CDS:Y46E12BL.4c Y46E12BL.4c 1398   II: 15218569-15218962
CDS:Y46E12BL.4h Y46E12BL.4h 1404   II: 15218569-15218962
CDS:Y46E12BL.4d Y46E12BL.4d 552   II: 15223029-15223191
CDS:Y46E12BL.4b Y46E12BL.4b 1059   II: 15207523-15207571

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain