WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y46E12BL.4c Sequence Name  Y46E12BL.4c
Length (nt)  1398   Chromosome Location  II: 15218569-15218962
Chromosome . Primary Identifier  II Chromosome Location . Start  15218569
Chromosome Location . End  15218962
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46E12BL.4c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48635 SPSB-1, isoform c 52.5 465 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00056665

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y46E12BL.4c 15218569 15218962 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021597 spsb-1 Y46E12BL.4 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y46E12BL.4c 15218569 15218962 1
CDS:Y46E12BL.4c 15220192 15220445 1
CDS:Y46E12BL.4c 15222831 15223191 1
CDS:Y46E12BL.4c 15224724 15224815 1
CDS:Y46E12BL.4c 15226033 15226198 1
CDS:Y46E12BL.4c 15228289 15228419 1

1 Sequence

Length
1398

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y46E12BL.4c.1 Y46E12BL.4c.1 2494   II: 15218553-15229499