WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y50D7A.5 Sequence Name  Y50D7A.5
Length (nt)  531   Chromosome Location  III: 230435-230582
Chromosome . Primary Identifier  III Chromosome Location . Start  230435
Chromosome Location . End  230582
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50D7A.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26142 HPO-38 20.1 176 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00057088
WBRNAi00020833
WBRNAi00088781
WBRNAi00088674

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y50D7A.5 230435 230582 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021755 hpo-38 Y50D7A.5 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y50D7A.5 230435 230582 1
CDS:Y50D7A.5 232032 232120 1
CDS:Y50D7A.5 232328 232444 1
CDS:Y50D7A.5 234713 234774 1
CDS:Y50D7A.5 234919 235033 1

1 Sequence

Length
531

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y50D7A.5.1 Y50D7A.5.1 596   III: 230429-235092