WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y55B1BM.1a Sequence Name  Y55B1BM.1a
Length (nt)  1593   Chromosome Location  III: 408418-408574
Chromosome . Primary Identifier  III Chromosome Location . Start  408418
Chromosome Location . End  408574
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55B1BM.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29124 STIM-1, isoform a 60.0 530 Caenorhabditis elegans
 

Other

30 RNAi

WormBase ID
WBRNAi00057503
WBRNAi00099869
WBRNAi00100509
WBRNAi00033554
WBRNAi00021009
WBRNAi00021010
WBRNAi00071811
WBRNAi00065140
WBRNAi00097818
WBRNAi00087722
WBRNAi00100883
WBRNAi00071388
WBRNAi00099263
WBRNAi00099667
WBRNAi00099465
WBRNAi00100135
WBRNAi00065141
WBRNAi00065143
WBRNAi00065144
WBRNAi00065145
WBRNAi00065146
WBRNAi00065147
WBRNAi00065142
WBRNAi00100322
WBRNAi00065148
WBRNAi00065149
WBRNAi00065150
WBRNAi00065152
WBRNAi00100696
WBRNAi00101070

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y55B1BM.1a 408418 408574 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021910 stim-1 Y55B1BM.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y55B1BM.1a 408418 408574 -1
CDS:Y55B1BM.1a 408913 409034 -1
CDS:Y55B1BM.1a 409914 409996 -1
CDS:Y55B1BM.1a 410347 410406 -1
CDS:Y55B1BM.1a 410548 410645 -1
CDS:Y55B1BM.1a 411249 411389 -1
CDS:Y55B1BM.1a 412091 412270 -1
CDS:Y55B1BM.1a 413879 414036 -1
CDS:Y55B1BM.1a 416948 417190 -1
CDS:Y55B1BM.1a 417604 417747 -1
CDS:Y55B1BM.1a 418089 418213 -1
CDS:Y55B1BM.1a 418611 418692 -1

1 Sequence

Length
1593

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y55B1BM.1a.1 Y55B1BM.1a.1 1930   III: 408127-418738