WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T19C3.1 Sequence Name  T19C3.1
Length (nt)  1446   Chromosome Location  III: 606991-607044
Chromosome . Primary Identifier  III Chromosome Location . Start  606991
Chromosome Location . End  607044
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19C3.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53916 BEST-17 55.1 481 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00053504
WBRNAi00018823
WBRNAi00006600

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T19C3.1 606991 607044 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020559 best-17 T19C3.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:T19C3.1 606991 607044 -1
CDS:T19C3.1 607093 607187 -1
CDS:T19C3.1 607240 607377 -1
CDS:T19C3.1 607514 607651 -1
CDS:T19C3.1 607696 607768 -1
CDS:T19C3.1 608030 608260 -1
CDS:T19C3.1 608302 608379 -1
CDS:T19C3.1 608728 608958 -1
CDS:T19C3.1 609012 609240 -1
CDS:T19C3.1 609396 609498 -1
CDS:T19C3.1 609543 609618 -1

1 Sequence

Length
1446

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T19C3.1.1 T19C3.1.1 1543   III: 606925-609649