WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T17H7.4e.1 Sequence Name  T17H7.4e.1
Length (nt)  3659   Chromosome Location  III: 727207-734120
Chromosome . Primary Identifier  III Chromosome Location . Start  727207
Chromosome Location . End  734120 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T17H7.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003936 pat-12 T17H7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T17H7.4e T17H7.4e 1431   III: 727639-727705

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4e.1 727207 734120 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77967   499   III: 727207-727705 Caenorhabditis elegans
Exon77984   117   III: 727948-728064 Caenorhabditis elegans
Exon77997   310   III: 728117-728426 Caenorhabditis elegans
Exon78014   163   III: 728882-729044 Caenorhabditis elegans
Exon78029   101   III: 729093-729193 Caenorhabditis elegans
Exon78040   141   III: 729318-729458 Caenorhabditis elegans
Exon78050   106   III: 729580-729685 Caenorhabditis elegans
Exon78065   159   III: 729986-730144 Caenorhabditis elegans
Exon78091   87   III: 731532-731618 Caenorhabditis elegans
Exon78101   129   III: 731676-731804 Caenorhabditis elegans
Exon78115   21   III: 731906-731926 Caenorhabditis elegans
Exon78133   385   III: 732148-732532 Caenorhabditis elegans
Exon78141   306   III: 732583-732888 Caenorhabditis elegans
Exon78149   449   III: 732940-733388 Caenorhabditis elegans
Exon78157   686   III: 733435-734120 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4e.1 727207 734120 -1

1 Sequence

Length
3659

1 Sequence Ontology Term

Identifier Name Description
transcript