WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T17H7.4i.1 Sequence Name  T17H7.4i.1
Length (nt)  1736   Chromosome Location  III: 727328-732258
Chromosome . Primary Identifier  III Chromosome Location . Start  727328
Chromosome Location . End  732258 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T17H7.4i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003936 pat-12 T17H7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T17H7.4i T17H7.4i 1344   III: 727639-727705

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4i.1 727328 732258 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77976   378   III: 727328-727705 Caenorhabditis elegans
Exon77988   117   III: 727948-728064 Caenorhabditis elegans
Exon78001   310   III: 728117-728426 Caenorhabditis elegans
Exon78018   163   III: 728882-729044 Caenorhabditis elegans
Exon78033   101   III: 729093-729193 Caenorhabditis elegans
Exon78042   141   III: 729318-729458 Caenorhabditis elegans
Exon78054   106   III: 729580-729685 Caenorhabditis elegans
Exon78069   159   III: 729986-730144 Caenorhabditis elegans
Exon78077   129   III: 730309-730437 Caenorhabditis elegans
Exon78119   21   III: 731906-731926 Caenorhabditis elegans
Exon78125   111   III: 732148-732258 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4i.1 727328 732258 -1

1 Sequence

Length
1736

1 Sequence Ontology Term

Identifier Name Description
transcript