WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T17H7.4a.1 Sequence Name  T17H7.4a.1
Length (nt)  2424   Chromosome Location  III: 727211-746542
Chromosome . Primary Identifier  III Chromosome Location . Start  727211
Chromosome Location . End  746542 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T17H7.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003936 pat-12 T17H7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T17H7.4a T17H7.4a 1992   III: 727639-727705

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4a.1 727211 746542 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78010   495   III: 727211-727705 Caenorhabditis elegans
Exon78016   117   III: 727948-728064 Caenorhabditis elegans
Exon78029   310   III: 728117-728426 Caenorhabditis elegans
Exon78044   163   III: 728882-729044 Caenorhabditis elegans
Exon78059   101   III: 729093-729193 Caenorhabditis elegans
Exon78080   106   III: 729580-729685 Caenorhabditis elegans
Exon78095   159   III: 729986-730144 Caenorhabditis elegans
Exon78116   93   III: 730592-730684 Caenorhabditis elegans
Exon78124   87   III: 731532-731618 Caenorhabditis elegans
Exon78134   129   III: 731676-731804 Caenorhabditis elegans
Exon78144   21   III: 731906-731926 Caenorhabditis elegans
Exon78223   21   III: 739327-739347 Caenorhabditis elegans
Exon78231   99   III: 739660-739758 Caenorhabditis elegans
Exon78239   99   III: 739808-739906 Caenorhabditis elegans
Exon78247   135   III: 739955-740089 Caenorhabditis elegans
Exon78258   198   III: 742985-743182 Caenorhabditis elegans
Exon78271   91   III: 746452-746542 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4a.1 727211 746542 -1

1 Sequence

Length
2424

1 Sequence Ontology Term

Identifier Name Description
transcript