WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T17H7.4h.1 Sequence Name  T17H7.4h.1
Length (nt)  1373   Chromosome Location  III: 727639-732335
Chromosome . Primary Identifier  III Chromosome Location . Start  727639
Chromosome Location . End  732335 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T17H7.4h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003936 pat-12 T17H7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T17H7.4h T17H7.4h 1215   III: 727639-727705

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4h.1 727639 732335 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77977   67   III: 727639-727705 Caenorhabditis elegans
Exon77987   117   III: 727948-728064 Caenorhabditis elegans
Exon78000   310   III: 728117-728426 Caenorhabditis elegans
Exon78017   163   III: 728882-729044 Caenorhabditis elegans
Exon78032   101   III: 729093-729193 Caenorhabditis elegans
Exon78041   141   III: 729318-729458 Caenorhabditis elegans
Exon78053   106   III: 729580-729685 Caenorhabditis elegans
Exon78068   159   III: 729986-730144 Caenorhabditis elegans
Exon78118   21   III: 731906-731926 Caenorhabditis elegans
Exon78126   188   III: 732148-732335 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4h.1 727639 732335 -1

1 Sequence

Length
1373

1 Sequence Ontology Term

Identifier Name Description
transcript