WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T17H7.4d.4 Sequence Name  T17H7.4d.4
Length (nt)  4041   Chromosome Location  III: 728363-738978
Chromosome . Primary Identifier  III Chromosome Location . Start  728363
Chromosome Location . End  738978 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T17H7.4d.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003936 pat-12 T17H7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T17H7.4d T17H7.4d 3093   III: 732353-732532

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4d.4 728363 738978 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78043   64   III: 728363-728426 Caenorhabditis elegans
Exon78050   163   III: 728882-729044 Caenorhabditis elegans
Exon78065   101   III: 729093-729193 Caenorhabditis elegans
Exon78086   106   III: 729580-729685 Caenorhabditis elegans
Exon78101   159   III: 729986-730144 Caenorhabditis elegans
Exon78113   129   III: 730309-730437 Caenorhabditis elegans
Exon78150   21   III: 731906-731926 Caenorhabditis elegans
Exon78167   385   III: 732148-732532 Caenorhabditis elegans
Exon78174   306   III: 732583-732888 Caenorhabditis elegans
Exon78182   135   III: 732940-733074 Caenorhabditis elegans
Exon78190   99   III: 733290-733388 Caenorhabditis elegans
Exon78198   1866   III: 733435-735300 Caenorhabditis elegans
Exon78205   270   III: 735358-735627 Caenorhabditis elegans
Exon78212   87   III: 737594-737680 Caenorhabditis elegans
Exon78219   150   III: 738829-738978 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4d.4 728363 738978 -1

1 Sequence

Length
4041

1 Sequence Ontology Term

Identifier Name Description
transcript