WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T17H7.4d.7 Sequence Name  T17H7.4d.7
Length (nt)  3299   Chromosome Location  III: 732147-738978
Chromosome . Primary Identifier  III Chromosome Location . Start  732147
Chromosome Location . End  738978 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T17H7.4d.7

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003936 pat-12 T17H7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T17H7.4d T17H7.4d 3093   III: 732353-732532

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4d.7 732147 738978 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78124   386   III: 732147-732532 Caenorhabditis elegans
Exon78140   306   III: 732583-732888 Caenorhabditis elegans
Exon78148   135   III: 732940-733074 Caenorhabditis elegans
Exon78156   99   III: 733290-733388 Caenorhabditis elegans
Exon78164   1866   III: 733435-735300 Caenorhabditis elegans
Exon78171   270   III: 735358-735627 Caenorhabditis elegans
Exon78178   87   III: 737594-737680 Caenorhabditis elegans
Exon78185   150   III: 738829-738978 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4d.7 732147 738978 -1

1 Sequence

Length
3299

1 Sequence Ontology Term

Identifier Name Description
transcript