WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0412.1b.1 Sequence Name  B0412.1b.1
Length (nt)  1365   Chromosome Location  III: 817470-821699
Chromosome . Primary Identifier  III Chromosome Location . Start  817470
Chromosome Location . End  821699 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0412.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000895 dac-1 B0412.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0412.1b B0412.1b 954   III: 818599-818616

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0412.1b.1 817470 821699 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78432   92   III: 817470-817561 Caenorhabditis elegans
Exon78434   278   III: 818339-818616 Caenorhabditis elegans
Exon78436   102   III: 818670-818771 Caenorhabditis elegans
Exon78438   107   III: 818978-819084 Caenorhabditis elegans
Exon78440   86   III: 820353-820438 Caenorhabditis elegans
Exon78442   115   III: 820481-820595 Caenorhabditis elegans
Exon78444   121   III: 820642-820762 Caenorhabditis elegans
Exon78446   193   III: 820812-821004 Caenorhabditis elegans
Exon78448   271   III: 821429-821699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0412.1b.1 817470 821699 1

1 Sequence

Length
1365

1 Sequence Ontology Term

Identifier Name Description
transcript