WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71D11A.1a.1 Sequence Name  Y71D11A.1a.1
Length (nt)  8920   Chromosome Location  III: 1152044-1181147
Chromosome . Primary Identifier  III Chromosome Location . Start  1152044
Chromosome Location . End  1181147 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71D11A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022103 cdh-12 Y71D11A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71D11A.1a Y71D11A.1a 8682   III: 1152044-1152107

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71D11A.1a.1 1152044 1181147 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79137   64   III: 1152044-1152107 Caenorhabditis elegans
Exon79138   161   III: 1152761-1152921 Caenorhabditis elegans
Exon79139   333   III: 1153419-1153751 Caenorhabditis elegans
Exon79140   159   III: 1154550-1154708 Caenorhabditis elegans
Exon79141   513   III: 1154772-1155284 Caenorhabditis elegans
Exon79142   306   III: 1157010-1157315 Caenorhabditis elegans
Exon79143   1107   III: 1157959-1159065 Caenorhabditis elegans
Exon79145   117   III: 1160350-1160466 Caenorhabditis elegans
Exon79149   132   III: 1164037-1164168 Caenorhabditis elegans
Exon79151   165   III: 1164509-1164673 Caenorhabditis elegans
Exon79155   217   III: 1164935-1165151 Caenorhabditis elegans
Exon79157   292   III: 1165449-1165740 Caenorhabditis elegans
Exon79159   346   III: 1166064-1166409 Caenorhabditis elegans
Exon79162   384   III: 1167109-1167492 Caenorhabditis elegans
Exon79164   117   III: 1167555-1167671 Caenorhabditis elegans
Exon79167   483   III: 1168950-1169432 Caenorhabditis elegans
Exon79169   638   III: 1169967-1170604 Caenorhabditis elegans
Exon79171   1744   III: 1171665-1173408 Caenorhabditis elegans
Exon79177   178   III: 1176995-1177172 Caenorhabditis elegans
Exon79179   138   III: 1177217-1177354 Caenorhabditis elegans
Exon79181   452   III: 1177711-1178162 Caenorhabditis elegans
Exon79183   317   III: 1178914-1179230 Caenorhabditis elegans
Exon79185   153   III: 1179601-1179753 Caenorhabditis elegans
Exon79187   121   III: 1180677-1180797 Caenorhabditis elegans
Exon79190   283   III: 1180865-1181147 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71D11A.1a.1 1152044 1181147 1

1 Sequence

Length
8920

1 Sequence Ontology Term

Identifier Name Description
transcript