WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y71D11A.1a Sequence Name  Y71D11A.1a
Length (nt)  8682   Chromosome Location  III: 1152044-1152107
Chromosome . Primary Identifier  III Chromosome Location . Start  1152044
Chromosome Location . End  1152107
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71D11A.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53242 CDH-12, isoform a 318.4 2893 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00058139
WBRNAi00058620
WBRNAi00058621
WBRNAi00020001
WBRNAi00019992
WBRNAi00019994
WBRNAi00037914
WBRNAi00065252

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y71D11A.1a 1152044 1152107 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022103 cdh-12 Y71D11A.1 Caenorhabditis elegans

25 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y71D11A.1a 1152044 1152107 1
CDS:Y71D11A.1a 1152761 1152921 1
CDS:Y71D11A.1a 1153419 1153751 1
CDS:Y71D11A.1a 1154550 1154708 1
CDS:Y71D11A.1a 1154772 1155284 1
CDS:Y71D11A.1a 1157010 1157315 1
CDS:Y71D11A.1a 1157959 1159065 1
CDS:Y71D11A.1a 1160350 1160466 1
CDS:Y71D11A.1a 1164037 1164168 1
CDS:Y71D11A.1a 1164509 1164673 1
CDS:Y71D11A.1a 1164935 1165151 1
CDS:Y71D11A.1a 1165449 1165740 1
CDS:Y71D11A.1a 1166064 1166409 1
CDS:Y71D11A.1a 1167109 1167492 1
CDS:Y71D11A.1a 1167555 1167671 1
CDS:Y71D11A.1a 1168950 1169432 1
CDS:Y71D11A.1a 1169967 1170604 1
CDS:Y71D11A.1a 1171665 1173408 1
CDS:Y71D11A.1a 1176995 1177172 1
CDS:Y71D11A.1a 1177217 1177354 1
CDS:Y71D11A.1a 1177711 1178162 1
CDS:Y71D11A.1a 1178914 1179230 1
CDS:Y71D11A.1a 1179601 1179753 1
CDS:Y71D11A.1a 1180677 1180797 1
CDS:Y71D11A.1a 1180865 1180909 1

1 Sequence

Length
8682

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71D11A.1a.1 Y71D11A.1a.1 8920   III: 1152044-1181147