WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53A3.4a Sequence Name  F53A3.4a
Length (nt)  6045   Chromosome Location  III: 1905967-1906011
Chromosome . Primary Identifier  III Chromosome Location . Start  1905967
Chromosome Location . End  1906011
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53A3.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44019 PQN-41, isoform a 226.1 2014 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00094305
WBRNAi00000837
WBRNAi00039170
WBRNAi00048054
WBRNAi00048055
WBRNAi00068803
WBRNAi00068802
WBRNAi00009839
WBRNAi00015456
WBRNAi00015457
WBRNAi00094020
WBRNAi00006980
WBRNAi00111492
WBRNAi00068740
WBRNAi00068741
WBRNAi00094421
WBRNAi00111490
WBRNAi00111491

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53A3.4a 1905967 1906011 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004128 pqn-41 F53A3.4 Caenorhabditis elegans

22 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53A3.4a 1905967 1906011 1
CDS:F53A3.4a 1906060 1906267 1
CDS:F53A3.4a 1906341 1906922 1
CDS:F53A3.4a 1907802 1907998 1
CDS:F53A3.4a 1908187 1908321 1
CDS:F53A3.4a 1909285 1909443 1
CDS:F53A3.4a 1910279 1910530 1
CDS:F53A3.4a 1911127 1911318 1
CDS:F53A3.4a 1912917 1913123 1
CDS:F53A3.4a 1914173 1914431 1
CDS:F53A3.4a 1915463 1915623 1
CDS:F53A3.4a 1915729 1916216 1
CDS:F53A3.4a 1916946 1917189 1
CDS:F53A3.4a 1917239 1917304 1
CDS:F53A3.4a 1927677 1927949 1
CDS:F53A3.4a 1929106 1929473 1
CDS:F53A3.4a 1930738 1931287 1
CDS:F53A3.4a 1931962 1932374 1
CDS:F53A3.4a 1934184 1934523 1
CDS:F53A3.4a 1936367 1936540 1
CDS:F53A3.4a 1937681 1938100 1
CDS:F53A3.4a 1939019 1939330 1

1 Sequence

Length
6045

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53A3.4a.1 F53A3.4a.1 6293   III: 1905958-1939569