WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00111490 Genotype  rrf-3(pk1426) II; him-8(e1489) IV; qIs56 V
Phenotype Remark  The linker cell survives in 20 percent of animals after pqn-41(RNAi). Authors show that pqn-41 functions cell-autonomously and is expressed at the onset of linker-cell death. Remark  lag-2 promoter::GFP (qIs56) and authors note use of the OS2570 strain.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004128 pqn-41 F53A3.4 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53A3.4a F53A3.4a 6045   III: 1905967-1906011
CDS:F53A3.4d F53A3.4d 1284   III: 1933265-1933302
CDS:F53A3.4b F53A3.4b 6150   III: 1905967-1906011

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001173 non apoptotic cell death variant Animals exhibit variations in the specific activation or halting of processes within a cell that occur through necrosis or programmed cell death pathways different from apoptosis, so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death, compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040855

0 Strain