WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48G9A.4a Sequence Name  Y48G9A.4a
Length (nt)  3348   Chromosome Location  III: 2134746-2134820
Chromosome . Primary Identifier  III Chromosome Location . Start  2134746
Chromosome Location . End  2134820
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G9A.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32979 FRL-1, isoform a 124.0 1115 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00078118
WBRNAi00056983

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y48G9A.4a 2134746 2134820 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021698 frl-1 Y48G9A.4 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y48G9A.4a 2134746 2134820 1
CDS:Y48G9A.4a 2136412 2136665 1
CDS:Y48G9A.4a 2137304 2137584 1
CDS:Y48G9A.4a 2138320 2138500 1
CDS:Y48G9A.4a 2140092 2140332 1
CDS:Y48G9A.4a 2141364 2141784 1
CDS:Y48G9A.4a 2143530 2143789 1
CDS:Y48G9A.4a 2145622 2146036 1
CDS:Y48G9A.4a 2147433 2147971 1
CDS:Y48G9A.4a 2148883 2149239 1
CDS:Y48G9A.4a 2150155 2150341 1
CDS:Y48G9A.4a 2151075 2151211 1

1 Sequence

Length
3348

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48G9A.4a.1 Y48G9A.4a.1 3691   III: 2134746-2151554