WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54F10BM.3 Sequence Name  Y54F10BM.3
Length (nt)  1869   Chromosome Location  III: 2282086-2282158
Chromosome . Primary Identifier  III Chromosome Location . Start  2282086
Chromosome Location . End  2282158
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54F10BM.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54204 Y54F10BM.3 71.4 622 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00007363
WBRNAi00057416

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54F10BM.3 2282086 2282158 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021858 Y54F10BM.3 Y54F10BM.3 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54F10BM.3 2282086 2282158 1
CDS:Y54F10BM.3 2283095 2283146 1
CDS:Y54F10BM.3 2283199 2283273 1
CDS:Y54F10BM.3 2283797 2284091 1
CDS:Y54F10BM.3 2284231 2284384 1
CDS:Y54F10BM.3 2285234 2285432 1
CDS:Y54F10BM.3 2285998 2286263 1
CDS:Y54F10BM.3 2287583 2287836 1
CDS:Y54F10BM.3 2288348 2288554 1
CDS:Y54F10BM.3 2288999 2289253 1
CDS:Y54F10BM.3 2289838 2289876 1

1 Sequence

Length
1869

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54F10BM.3.1 Y54F10BM.3.1 2046   III: 2282025-2289992