WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H04J21.3b.1 Sequence Name  H04J21.3b.1
Length (nt)  3575   Chromosome Location  III: 2347591-2362042
Chromosome . Primary Identifier  III Chromosome Location . Start  2347591
Chromosome Location . End  2362042 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H04J21.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001589 gip-1 H04J21.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H04J21.3b H04J21.3b 2892   III: 2347595-2347667

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H04J21.3b.1 2347591 2362042 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81086   77   III: 2347591-2347667 Caenorhabditis elegans
Exon81089   93   III: 2348637-2348729 Caenorhabditis elegans
Exon81091   258   III: 2348779-2349036 Caenorhabditis elegans
Exon81093   205   III: 2350247-2350451 Caenorhabditis elegans
Exon81095   254   III: 2352182-2352435 Caenorhabditis elegans
Exon81097   119   III: 2353539-2353657 Caenorhabditis elegans
Exon81100   251   III: 2355292-2355542 Caenorhabditis elegans
Exon81103   172   III: 2356455-2356626 Caenorhabditis elegans
Exon81105   84   III: 2356685-2356768 Caenorhabditis elegans
Exon81107   284   III: 2358581-2358864 Caenorhabditis elegans
Exon81109   163   III: 2359586-2359748 Caenorhabditis elegans
Exon81111   100   III: 2360363-2360462 Caenorhabditis elegans
Exon81113   1515   III: 2360528-2362042 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H04J21.3b.1 2347591 2362042 1

1 Sequence

Length
3575

1 Sequence Ontology Term

Identifier Name Description
transcript