WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H04J21.3b Sequence Name  H04J21.3b
Length (nt)  2892   Chromosome Location  III: 2347595-2347667
Chromosome . Primary Identifier  III Chromosome Location . Start  2347595
Chromosome Location . End  2347667
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H04J21.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32450 GIP-1, isoform b 109.1 963 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00049284
WBRNAi00049286
WBRNAi00016182
WBRNAi00033657
WBRNAi00002697
WBRNAi00002764
WBRNAi00022771
WBRNAi00111813
WBRNAi00069161
WBRNAi00049285
WBRNAi00086490

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H04J21.3b 2347595 2347667 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001589 gip-1 H04J21.3 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:H04J21.3b 2347595 2347667 1
CDS:H04J21.3b 2348637 2348729 1
CDS:H04J21.3b 2348779 2349036 1
CDS:H04J21.3b 2350247 2350451 1
CDS:H04J21.3b 2352182 2352435 1
CDS:H04J21.3b 2353539 2353657 1
CDS:H04J21.3b 2355292 2355542 1
CDS:H04J21.3b 2356455 2356626 1
CDS:H04J21.3b 2356685 2356768 1
CDS:H04J21.3b 2358581 2358864 1
CDS:H04J21.3b 2359586 2359748 1
CDS:H04J21.3b 2360363 2360462 1
CDS:H04J21.3b 2360528 2361363 1

1 Sequence

Length
2892

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H04J21.3b.1 H04J21.3b.1 3575   III: 2347591-2362042