WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H14E04.2c.1 Sequence Name  H14E04.2c.1
Length (nt)  2025   Chromosome Location  III: 2376195-2384841
Chromosome . Primary Identifier  III Chromosome Location . Start  2376195
Chromosome Location . End  2384841 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H14E04.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019199 H14E04.2 H14E04.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H14E04.2c H14E04.2c 1749   III: 2376200-2376279

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H14E04.2c.1 2376195 2384841 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81131   85   III: 2376195-2376279 Caenorhabditis elegans
Exon81134   95   III: 2376329-2376423 Caenorhabditis elegans
Exon81137   177   III: 2376515-2376691 Caenorhabditis elegans
Exon81141   132   III: 2376878-2377009 Caenorhabditis elegans
Exon81142   21   III: 2377093-2377113 Caenorhabditis elegans
Exon81145   271   III: 2379598-2379868 Caenorhabditis elegans
Exon81149   138   III: 2380765-2380902 Caenorhabditis elegans
Exon81153   275   III: 2381638-2381912 Caenorhabditis elegans
Exon81157   329   III: 2382479-2382807 Caenorhabditis elegans
Exon81161   162   III: 2383838-2383999 Caenorhabditis elegans
Exon81165   340   III: 2384502-2384841 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H14E04.2c.1 2376195 2384841 1

1 Sequence

Length
2025

1 Sequence Ontology Term

Identifier Name Description
transcript