WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10F2.1.1 Sequence Name  R10F2.1.1
Length (nt)  8808   Chromosome Location  III: 2910906-2935961
Chromosome . Primary Identifier  III Chromosome Location . Start  2910906
Chromosome Location . End  2935961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10F2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019994 cdh-1 R10F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10F2.1 R10F2.1 8340   III: 2910970-2911170

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10F2.1.1 2910906 2935961 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82075   265   III: 2910906-2911170 Caenorhabditis elegans
Exon82076   183   III: 2914828-2915010 Caenorhabditis elegans
Exon82077   129   III: 2915459-2915587 Caenorhabditis elegans
Exon82078   125   III: 2915636-2915760 Caenorhabditis elegans
Exon82079   404   III: 2916482-2916885 Caenorhabditis elegans
Exon82080   449   III: 2917449-2917897 Caenorhabditis elegans
Exon82081   84   III: 2917945-2918028 Caenorhabditis elegans
Exon82082   108   III: 2918663-2918770 Caenorhabditis elegans
Exon82093   69   III: 2925284-2925352 Caenorhabditis elegans
Exon82094   103   III: 2925781-2925883 Caenorhabditis elegans
Exon82095   242   III: 2926060-2926301 Caenorhabditis elegans
Exon82096   1863   III: 2927213-2929075 Caenorhabditis elegans
Exon82097   2450   III: 2929125-2931574 Caenorhabditis elegans
Exon82098   745   III: 2932023-2932767 Caenorhabditis elegans
Exon82100   195   III: 2933340-2933534 Caenorhabditis elegans
Exon82101   138   III: 2933587-2933724 Caenorhabditis elegans
Exon82102   345   III: 2933775-2934119 Caenorhabditis elegans
Exon82103   245   III: 2934413-2934657 Caenorhabditis elegans
Exon82104   127   III: 2935018-2935144 Caenorhabditis elegans
Exon82105   539   III: 2935423-2935961 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10F2.1.1 2910906 2935961 1

1 Sequence

Length
8808

1 Sequence Ontology Term

Identifier Name Description
transcript