WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R10F2.1 Sequence Name  R10F2.1
Length (nt)  8340   Chromosome Location  III: 2910970-2911170
Chromosome . Primary Identifier  III Chromosome Location . Start  2910970
Chromosome Location . End  2911170
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10F2.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38097 CDH-1 306.3 2779 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00051728
WBRNAi00051729
WBRNAi00051730
WBRNAi00027439
WBRNAi00017722
WBRNAi00026080
WBRNAi00026081
WBRNAi00006508
WBRNAi00006579
WBRNAi00101844

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R10F2.1 2910970 2911170 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019994 cdh-1 R10F2.1 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:R10F2.1 2910970 2911170 1
CDS:R10F2.1 2914828 2915010 1
CDS:R10F2.1 2915459 2915587 1
CDS:R10F2.1 2915636 2915760 1
CDS:R10F2.1 2916482 2916885 1
CDS:R10F2.1 2917449 2917897 1
CDS:R10F2.1 2917945 2918028 1
CDS:R10F2.1 2918663 2918770 1
CDS:R10F2.1 2925284 2925352 1
CDS:R10F2.1 2925781 2925883 1
CDS:R10F2.1 2926060 2926301 1
CDS:R10F2.1 2927213 2929075 1
CDS:R10F2.1 2929125 2931574 1
CDS:R10F2.1 2932023 2932767 1
CDS:R10F2.1 2933340 2933534 1
CDS:R10F2.1 2933587 2933724 1
CDS:R10F2.1 2933775 2934119 1
CDS:R10F2.1 2934413 2934657 1
CDS:R10F2.1 2935018 2935144 1
CDS:R10F2.1 2935423 2935557 1

1 Sequence

Length
8340

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R10F2.1.1 R10F2.1.1 8808   III: 2910906-2935961