WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00195901 Gene Name  H06I04.10
Sequence Name  ? H06I04.10 Organism  Caenorhabditis elegans
Biotype  SO:0001263 Genetic Position 
Length (nt)  ? 225
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00195901

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H06I04.10 H06I04.10 225   III: 3067569-3067793
 

Other

0 CDSs

0 RNAi Result

7 Allele

Public Name
gk962532
gk964281
WBVar00236314
WBVar01938486
WBVar01566088
WBVar00053318
WBVar01898706

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00195901 3067569 3067793 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIII_3067794..3068309   516 III: 3067794-3068309 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum Transcripts that showed significantly decreased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. GFold3, logFC < -1 or > 1. WBPaper00066703:L.plantarum-pdxH_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00195901 3067569 3067793 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
225

1 Sequence Ontology Term