WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differentially expressed genes were estimated using a General Linear Model approach, negative binomial distribution, and a quasi-likelihood F-test. Genes with a P-value < 0.05 and fold change > 1 were considered significant. Description  Transcripts that showed significantly increased expression in H3.3 null mutant animals (FAS43 [his-69&his-70(uge44) III; his-72(tm2066) III; his-74(uge18) V; his-71(ok2289) X]) comparing to in N2 animals at L1 larva stage.
Primary Identifier  WBPaper00054191:H3.3(null)_L1_upregulated
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0 Anatomy Terms

307 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000133 amt-1 C05E11.4 Caenorhabditis elegans
WBGene00000136 amt-4 C05E11.5 Caenorhabditis elegans
WBGene00000155 app-1 W03G9.4 Caenorhabditis elegans
WBGene00000168 apx-1 K08D9.3 Caenorhabditis elegans
WBGene00000386 cdc-25.1 K06A5.7 Caenorhabditis elegans
WBGene00000388 cdc-25.3 ZK637.11 Caenorhabditis elegans
WBGene00000405 cdk-1 T05G5.3 Caenorhabditis elegans
WBGene00000411 cdl-1 R06F6.1 Caenorhabditis elegans
WBGene00000413 cdt-1 Y54E10A.15 Caenorhabditis elegans
WBGene00000460 ceh-39 T26C11.7 Caenorhabditis elegans
WBGene00000473 cey-2 F46F11.2 Caenorhabditis elegans
WBGene00000772 cpb-3 B0414.5 Caenorhabditis elegans
WBGene00000865 cyb-1 ZC168.4 Caenorhabditis elegans
WBGene00000866 cyb-2.1 Y43E12A.1 Caenorhabditis elegans
WBGene00000867 cyb-2.2 H31G24.4 Caenorhabditis elegans
WBGene00000868 cyb-3 T06E6.2 Caenorhabditis elegans
WBGene00000913 daf-18 T07A9.6 Caenorhabditis elegans
WBGene00000935 daz-1 F56D1.7 Caenorhabditis elegans
WBGene00001029 dnj-11 F38A5.13 Caenorhabditis elegans
WBGene00001104 dsl-2 W09G12.1 Caenorhabditis elegans
WBGene00001320 ent-1 ZK809.4 Caenorhabditis elegans
WBGene00001372 exo-3 R09B3.1 Caenorhabditis elegans
WBGene00001435 fkh-3 C29F7.4 Caenorhabditis elegans
WBGene00001436 fkh-4 C29F7.5 Caenorhabditis elegans
WBGene00001511 fzy-1 ZK177.6 Caenorhabditis elegans
WBGene00001569 meg-3 F52D2.4 Caenorhabditis elegans
WBGene00001595 gld-1 T23G11.3 Caenorhabditis elegans
WBGene00001597 gld-3 T07F8.3 Caenorhabditis elegans
WBGene00001607 gln-6 C28D4.3 Caenorhabditis elegans
WBGene00001609 glp-1 F02A9.6 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

5 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001943 his-69 E03A3.3 Caenorhabditis elegans
WBGene00001944 his-70 E03A3.4 Caenorhabditis elegans
WBGene00001945 his-71 F45E1.6 Caenorhabditis elegans
WBGene00001946 his-72 Y49E10.6 Caenorhabditis elegans
WBGene00012276 his-74 W05B10.1 Caenorhabditis elegans

0 Regulated By Molecule