WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y53G8AM.5 Sequence Name  Y53G8AM.5
Length (nt)  690   Chromosome Location  III: 3256730-3256813
Chromosome . Primary Identifier  III Chromosome Location . Start  3256730
Chromosome Location . End  3256813
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53G8AM.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25415 NSPG-7.2 25.3 229 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00057307
WBRNAi00020966
WBRNAi00037436

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y53G8AM.5 3256730 3256813 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021805 nspg-7.2 Y53G8AM.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y53G8AM.5 3256730 3256813 -1
CDS:Y53G8AM.5 3256865 3256925 -1
CDS:Y53G8AM.5 3256975 3257080 -1
CDS:Y53G8AM.5 3257134 3257193 -1
CDS:Y53G8AM.5 3257249 3257346 -1
CDS:Y53G8AM.5 3258115 3258395 -1

1 Sequence

Length
690

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y53G8AM.5.1 Y53G8AM.5.1 742   III: 3256689-3258406