WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45H7.2d.1 Sequence Name  F45H7.2d.1
Length (nt)  4303   Chromosome Location  III: 3345126-3363001
Chromosome . Primary Identifier  III Chromosome Location . Start  3345126
Chromosome Location . End  3363001 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45H7.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001559 gei-1 F45H7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45H7.2d F45H7.2d 4026   III: 3346506-3346517

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45H7.2d.1 3345126 3363001 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82776   35   III: 3345126-3345160 Caenorhabditis elegans
Exon82779   112   III: 3345523-3345634 Caenorhabditis elegans
Exon82784   72   III: 3346024-3346095 Caenorhabditis elegans
Exon82788   70   III: 3346448-3346517 Caenorhabditis elegans
Exon82792   177   III: 3346568-3346744 Caenorhabditis elegans
Exon82799   81   III: 3347016-3347096 Caenorhabditis elegans
Exon82804   158   III: 3347143-3347300 Caenorhabditis elegans
Exon82809   125   III: 3347425-3347549 Caenorhabditis elegans
Exon82814   200   III: 3347864-3348063 Caenorhabditis elegans
Exon82819   58   III: 3348111-3348168 Caenorhabditis elegans
Exon82824   72   III: 3350502-3350573 Caenorhabditis elegans
Exon82830   137   III: 3355012-3355148 Caenorhabditis elegans
Exon82835   45   III: 3355650-3355694 Caenorhabditis elegans
Exon82840   161   III: 3356247-3356407 Caenorhabditis elegans
Exon82845   81   III: 3356668-3356748 Caenorhabditis elegans
Exon82850   132   III: 3356893-3357024 Caenorhabditis elegans
Exon82855   125   III: 3357402-3357526 Caenorhabditis elegans
Exon82859   343   III: 3357924-3358266 Caenorhabditis elegans
Exon82863   185   III: 3358585-3358769 Caenorhabditis elegans
Exon82868   907   III: 3359169-3360075 Caenorhabditis elegans
Exon82873   112   III: 3360640-3360751 Caenorhabditis elegans
Exon82878   227   III: 3360798-3361024 Caenorhabditis elegans
Exon82883   387   III: 3361130-3361516 Caenorhabditis elegans
Exon82890   183   III: 3361589-3361771 Caenorhabditis elegans
Exon82894   118   III: 3362884-3363001 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45H7.2d.1 3345126 3363001 1

1 Sequence

Length
4303

1 Sequence Ontology Term

Identifier Name Description
transcript