WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F45H7.2d Sequence Name  F45H7.2d
Length (nt)  4026   Chromosome Location  III: 3346506-3346517
Chromosome . Primary Identifier  III Chromosome Location . Start  3346506
Chromosome Location . End  3346517
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45H7.2d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44138 GEI-1, isoform d 150.8 1341 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00047455
WBRNAi00047456
WBRNAi00047457
WBRNAi00111055
WBRNAi00015046
WBRNAi00015047
WBRNAi00006021
WBRNAi00006292
WBRNAi00007010
WBRNAi00032331
WBRNAi00117891

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F45H7.2d 3346506 3346517 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001559 gei-1 F45H7.2 Caenorhabditis elegans

22 Locations


Feature . Primary Identifier
Start End Strand
CDS:F45H7.2d 3346506 3346517 1
CDS:F45H7.2d 3346568 3346744 1
CDS:F45H7.2d 3347016 3347096 1
CDS:F45H7.2d 3347143 3347300 1
CDS:F45H7.2d 3347425 3347549 1
CDS:F45H7.2d 3347864 3348063 1
CDS:F45H7.2d 3348111 3348168 1
CDS:F45H7.2d 3350502 3350573 1
CDS:F45H7.2d 3355012 3355148 1
CDS:F45H7.2d 3355650 3355694 1
CDS:F45H7.2d 3356247 3356407 1
CDS:F45H7.2d 3356668 3356748 1
CDS:F45H7.2d 3356893 3357024 1
CDS:F45H7.2d 3357402 3357526 1
CDS:F45H7.2d 3357924 3358266 1
CDS:F45H7.2d 3358585 3358769 1
CDS:F45H7.2d 3359169 3360075 1
CDS:F45H7.2d 3360640 3360751 1
CDS:F45H7.2d 3360798 3361024 1
CDS:F45H7.2d 3361130 3361516 1
CDS:F45H7.2d 3361589 3361771 1
CDS:F45H7.2d 3362884 3363001 1

1 Sequence

Length
4026

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F45H7.2d.1 F45H7.2d.1 4303   III: 3345126-3363001
Transcript:F45H7.2d.2 F45H7.2d.2 4262   III: 3345918-3363001
Transcript:F45H7.2d.3 F45H7.2d.3 4500   III: 3346446-3363415